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First Letter

A (36) | B (11) | C (38) | D (33) | E (21) | F (9) | G (10) | H (5) | I (26) | J (6) | K (3) | L (9) | M (19) | N (14) | O (18) | P (35) | Q (1) | R (25) | S (32) | T (17) | U (7) | V (5) | W (6)

	Large-Scale Reasoning over Functions in Biomedical Ontologies	Applied Ontology, Ontology engineering
	Lattice-Based ALC Ontology Embeddings With Saturation	protein function
	Lattice-Preserving ALC Ontology Embeddings	Neuro-Symbolic AI
	Layout Examples
	Leadership Team	Info
	LEP-AD: language embedding of proteins and attention to drugs predicts drug-target interactions	Drug mechanisms, Neuro-Symbolic AI
	LLM Agent Based Protein Function Prediction	protein function
	Machine Learning with Ontologies	Applied Ontology
	Mathematical Modeling and Differential Equations Research Group	Front Page
	Mathematical Modeling	Research
	Mathematics of Data Science, Machine Learning and Optimization	Research
	Mean-field Games and Nonlinear PDE Research Group	mean-field models, numerical analysis, Partial Differential Equations, Front Page
	Mechatronics and Energy Systems Research Group	Front Page
	Media coverage
	Microbial communities	Microbial communities
	Microelectronics Winter Camp (MEWC)	Opportunities
	Mixed Feelings About Mixed Precisions: Birds of a Feather at SC24!
	Mixed Feelings About Mixed Precisions: Birds of a Feather at SC25
	Mixed Feelings About Mixed Precisions: Birds of a Feather at SC26
	Modelling and Simulation Research Group	Front Page
	Molecular basis and cellular effects of Janus-class–driven cytoplasmic PYK2 coacervates	bioengineering, Drug mechanisms
	mOWL	Applied Ontology, Neuro-Symbolic AI, Ontology engineering
	mOWL Tutorial	Applied Ontology
	mOWL: Python library for machine learning with biomedical ontologies	Neuro-Symbolic AI
	Multi-Drug Embedding	Biomedical Informatics, Drug mechanisms, Semantic similarity
	Multi-faceted semantic clustering with text-derived phenotypes	Biomedical Informatics, Phenotype informatics
	Nail abnormalities identified in an ageing study of 30 inbred mouse strains	Phenotype informatics
	NanoDesigner	Biomedical Informatics, Drug mechanisms, Semantic similarity
	Nanodesigner: resolving the complex-CDR interdependency with iterative refinement	bioengineering, Drug mechanisms
	Nanovisualization Research Group	Front Page
	Near-Field Communication	Research
	Networking Lab Research Group	Front Page
	Neural Multi-hop Logical Query Answering with Concept-Level Answers	Neuro-Symbolic AI
	Neuro-symbolic AI	Neuro-Symbolic AI
	Neuro-Symbolic AI in Life Sciences	Neuro-Symbolic AI
	Neuro-symbolic representation learning on biological knowledge graphs	Neuro-Symbolic AI, Ontology engineering
	Notions of similarity for systems biology models	Applied Ontology, Semantic similarity
	Numerical Analysis and High-Performance Computing	Research
	Numerical Mathematics Research Group	nonlinear waves, numerical methods, Partial Differential Equations, Front Page
	Numerical Methods for PDEs Research Group	Front Page
	OligoPVP: Phenotype-driven analysis of individual genomic information to prioritize oligogenic disease variants	genomics, Rare disease
	Omar Knio Research Group	bayesian inference, computational fluids mechanics, uncertainty quantification, Front Page
	Onto2Graph	Applied Ontology, Ontology engineering
	Onto2Vec	Applied Ontology, Neuro-Symbolic AI, Ontology engineering
	Onto2Vec: joint vector-based representation of biological entities and their ontology-based annotations	Applied Ontology, Neuro-Symbolic AI
	OntoFunc	Applied Ontology, Ontology engineering
	Ontology based mining of pathogen--disease associations from literature	Applied Ontology, Biomedical Informatics
	Ontology based mining of pathogen-disease associations from literature	Applied Ontology, Biomedical Informatics
	Ontology based text mining of gene-phenotype associations: application to candidate gene prediction	Biomedical Informatics, Rare disease
	Ontology Embedding: A Survey of Methods, Applications and Resources	Neuro-Symbolic AI
	Ontology engineering	Ontology engineering
	Ontology Tutorial	Applied Ontology
	Ontology-Based Concept Recognition by Using Word Embeddings	Biomedical Informatics, Neuro-Symbolic AI
	Ontology-based prediction of cancer driver genes	Applied Ontology, Biomedical Informatics
	Ontology-based validation and identification of regulatory phenotypes	Applied Ontology, Phenotype informatics
	OPA2Vec	Applied Ontology, Neuro-Symbolic AI, Ontology engineering
	OPA2Vec: combining formal and informal content of biomedical ontologies to improve similarity-based prediction	Neuro-Symbolic AI, Semantic similarity
	Optimization and Machine Learning Research Group	Front Page
	Partial Differential Equations and Applied Analysis	Research
	PathoPhenoDB	Biomedical Informatics, Drug mechanisms, Semantic similarity
	PathoPhenoDB: linking human pathogens to their disease phenotypes in support of infectious disease research	Biomedical Informatics, Rare disease
	Peter Markowich Research Group	numerical analysis, Partial Differential Equations, Front Page
	Peter Wonka Research Group	Front Page
	Phased genome assemblies and pangenome graphs of human populations of Japan and Saudi Arabia	genomics
	PhenoGoCon	Neuro-Symbolic AI, protein function
	PhenomeNet	Applied Ontology, Ontology engineering
	PhenomeNET-VP	genomics, Phenotype informatics, Rare disease
	Phenotype informatics	Phenotype informatics
	Phenotype-driven discovery of digenic variants in personal genome sequences	genomics, Phenotype informatics, Rare disease
	Photonics and Electromagnetics	Research
	Photonics Laboratory Research Group	Front Page
	Photonics Summer Camp (PSC)	Opportunities

	Positive-Unlabeled Learning with Adversarial Data Augmentation for Knowledge Graph Completion	Neuro-Symbolic AI
	Power and Energy Systems	Research
	predCAN	genomics, Phenotype informatics, Rare disease
	Predicting candidate genes from phenotypes, functions and anatomical site of expression	Biomedical Informatics, Rare disease
	Predicting protein functions using positive-unlabeled ranking with ontology-based priors	Neuro-Symbolic AI, protein function
	Prediction of Metabolic Pathway Involvement in Prokaryotic UniProtKB Data by Association Rule Mining	Biomedical Informatics, protein function
	Primalight Laboratory Research Group	Front Page
	Prioritizing genomic variants through neuro-symbolic, knowledge-enhanced learning	Neuro-Symbolic AI, Rare disease
	Privacy Awareness, Responsibility and Trustworthy Lab Research Group	Front Page
	Projects
	Prospective Students	Study
	Prospective Students	Study
	Prospective Students	Study
	Prospective Students	Study, Info
	Prospective Students	Study
	Protein function	protein function
	Protein function prediction as approximate semantic entailment	genomics
	PU-GO	Neuro-Symbolic AI, protein function
	Publications
	Publications
	Quantitative evaluation of ontology design patterns for combining pathology and anatomy ontologies	Applied Ontology, Ontology engineering
	Ranking Adverse Drug Reactions With Crowdsourcing	Biomedical Informatics, Drug mechanisms
	Rare disease	Rare disease
	Recent Publications
	Research	Research
	Research
	Research	Research